Oh yes actually that sort of happened to me too. The trusted root was imported ok however the intermediate CA cert I found in the Current User store. I opened the certificate from the chain in the wildcard and refreshed the MMC and it eventually appeared in the local comp store somehow. Now I have 2 of the same in the current user intermediate store but I don't think that matters so will leave it be. If you still have no luck it couldn't hurt to import the intermediate certificate separately.
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